Aparavirus seqs
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Genus: Aparavirus 
               
 

Virus

Strain

Region

Length

Accession No. Reference Comments
 
Species: Acute bee paralysis virus (ABPV)
  ABPV ? pol(p) 84 AF038361 A.C.F. Hung, unpublished from England; isolated from crude extract
  ABPV Rothamsted capsid(p) 467 AF126050 Ghosh et al., 1999b (unpublished)  
  ABPV ? CG 9491 AF150629 Govan and Davison, 2000 ORF1 contains an NPGP site
  ABPV Hungary 1 capsid(p) 398 AY059372 Bakonyi et al., 2002a  
  ABPV Hungary 1 CG 9459 AF486072;
AY053373
Bakonyi et al., 2002b ORF1 contains an NPGP site
  ABPV Poland 1 CG 9463 AF486073;
AY053369
Bakonyi et al., 2002b ORF1 contains an NPGP site
  ABPV ? (France, 1990) capsid(p) 374 AY152709 Ribiere et al., unpub. (a)  
  ABPV ? (France, 1990) capsid(p) 374 AY152710 Ribiere et al., unpub. (a)  
 
Species: Israel acute paralysis virus (IAPV)
  IAPV ? CG 9499 EF219380 Maori et al., unpublished  
  IAPV ? ? 498 DQ490107 Maori and Sela, unpub. from DI particle
 
Species: Kashmir bee virus (KBV)
  KBV Pennsylvania CG 9524 AY275710 De Miranda et al., 2004  
  KBV Canada capsid 2525 AY452696 De Miranda et al., 2004  
  KBV ? pol(p) 414 AF052567 A.C.F. Hung, unpublished from parasitic mites, Varroa jacobsoni, found in a
honey bee colony in California, USA
  KBV ? pol(p) 414 AF052566 A.C.F. Hung, unpublished from a single honey bee in California, USA
  KBV ? pol(p) 414 AF037591 A.C.F. Hung, unpublished from a single honey bee in Maryland, USA
  KBV ? pol(p) 414 AF035359 A.C.F. Hung, unpublished from Maine, USA; isolated from crude extract
  KBV Canadian pol(p) 414 AF034542 A.C.F. Hung, unpublished  
  KBV Australian pol(p) 414 AF034541 A.C.F. Hung, unpublished  
  KBV ? pol(p) 414 AF027125 Hung and Shimanuki, 1999  
  KBV ? pol(p) 180 AF056044

Hung and Shimanuki, unpublished (a)

from a single honey bee in Maryland, USA
  KBV ? pol(p) 414 AF083239 Hung et al., unpublished (a) direct RT-PCR of crude viral extract from one mite
infested honey bee, Apis mellifera
  KBV 941227B-1 pol(p) 414 AF085478 Hung et al., unpublished (a) direct RT-PCR of crude viral extract from an Apis
mellifera
bee inoculated with Varroa mite
  KBV 941227B-3 pol(p) 414 AF085479 Hung et al., unpublished (a) direct RT-PCR of crude viral extract from an Apis
mellifera
bee inoculated with Varroa mite
  KBV 980824E-1 (California) pol(p) 414 AF093457 A.C.F. Hung, unpublished  
  KBV 980824E-2 (California) pol(p) 414 AF093458 A.C.F. Hung, unpublished  
  KBV 980828D-1 (California) pol(p) 414 AF093459 A.C.F. Hung, unpublished  
  KBV 980828D-2 (California) pol(p) 414 AF093460 A.C.F. Hung, unpublished  
  KBV Leamington, Canada pol(p) 547 AF117308 Hung and Shimanuki, unpublished (b)  
  KBV ? pol(p) 414 AF117953 Hung et al., unpublished (b) direct RT-PCR of Kashmir bee virus extract from one
Apis mellifera infested by Varroa mites
 
Species: Mud crab virus (MCV)
  MCDV Guangdong/China/2004 CG 10436 HM777507 Guo et al., unpub.  
 
Species: Taura syndrome virus (TSV)
  TSV Mexico/99 capsid 3278 AF277378

Robles-Sikisaka et al., 2001

 
  TSV Hawaii CG 10205 AF277675

Mari et al., 2002

 
  TSV Belize CG 9922 AY590471 Tang and Lightner, 2005
  TSV Th04Lv (Thailand) CG 10205 AY997025 Srisuvan et al., 2005  
  TSV ZHZC3TSV CG 10202 DQ104696 Huang and Lu, unpublished  
  TSV Venezuela CG 10095 DQ212790 Cote et al., 2008  
  TSV ? (Taiwan) capsid 3288 AF406789 Lien et al., unpublished  
  TSV Tw2KPmTSV capsid 3036 AY355309 Chang et al., 2004 Taiwan: south coastal waters, 2000;
host: Penaeus monodon
  TSV Tw2KMeTSV capsid 3036 AY355310 Chang et al., 2004 local fish market, Taiwan, 2000;
host: Metapenaeus ensis
  TSV Tw02PvTSV capsid 3036 AY355311 Chang et al., 2004 culture pond with recent TSV outbreak,
Taiwan: southern region , 2002;
host: Penaeus vannamei
TSV Saudi Arabia/2010 CG 10128 JX094350 Tang et al., 2012 host: Penaeus indicus
 
Species: Solenopsis invicta virus-1 (SINV-1)
  SINV-1 ? CG 8026 AY634314 Valles et al., 2004  
  SINV-1A ? capsid 2864 AY831776 Valles and Strong, 2005  
  SINV-1 TX5 (Texas, 2008) capsid 3368 FJ229495 Tufts et al., 2010  
 
CG = complete genome; (p) = partial gene sequence; N/A = not available on the EMBL/GenBank/DDBJ databases

References

 
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