|
|
Virus |
Strain |
Region |
Length |
Accession No. |
Reference |
Comments |
Group A |
Infectious flacherie virus (IFV) |
|
IFV |
? |
CG |
9650 |
AB000906 |
Isawa et al., 1998 |
polyprotein contains an NPG↓P
site |
|
IFV |
ZheJiang01/CHN |
CG |
9665 |
EU868609 |
Lu et al., 2009 |
China |
|
IFV |
Karnataka01/IND |
pol |
1920 |
EF422866 |
Lu et al., unpub. |
India |
|
IFV |
India? |
CG |
9665 |
HM569717 |
Chen et al., unpub. |
China/2004 |
|
IFV |
India? |
CG |
9675 |
HM245295 |
Chen et al., unpub. |
China/2004 |
|
Group B |
Sacbrood
virus (SBV) |
|
SBV |
Rothamstead |
CG |
8832 |
AF092924 |
Ghosh et al.,
1999 |
|
|
SBV |
Chinese SBV |
VP1 |
1038 |
AF251124 |
Jianxun et al.,
unpub. |
|
CG |
8740 |
AF469603 |
Zhang et al., unpub. |
|
|
SBV |
Sophia1 R80 |
capsid(p)? |
443 |
AY152712 |
Ribiere et al.,
unpub. |
|
non-structural(p) |
732 |
AY152713 |
Ribiere et al.,
unpub. |
|
|
SBV |
Riez2002 |
capsid(p)? |
443 |
AY152711 |
Ribiere et al.,
unpub. |
|
non-structural(p) |
732 |
AY152714 |
Ribiere et al.,
unpub. |
|
|
SBV |
Hai Hung (Vietnam) |
pol(p) |
880 |
AY311387 |
Le et al.,
unpub. |
|
|
SBV |
LN/China/2009 |
CG |
8863 |
HM237361 |
Ma et al., unpub. |
|
|
SBV |
II10/India/2012 |
polyprotein-cr |
8550 |
JX194121 |
Rangeshwaran et al.,
unpub. |
from Apis cerana |
|
Group C |
Perina nuda virus (PnV) |
|
PnV |
? |
CG |
9476 |
AF323747 |
Wu et al., 2002 |
polyprotein contains 2 NPG↓P
motifs |
Ectropis obliqua virus (EoV) |
|
EoV |
? |
CG* |
8067 |
AY341824 |
Wang et al., 2004 |
polyprotein contains 2 NPG↓P
motifs
* ~1400 nt missing from 5' end of the genome. |
|
Group D |
Deformed wing
virus (DWV) |
|
DWV |
Italy |
CG |
10131 |
AJ489744 |
Lanzi
et al., 2006 |
polyprotein contains an NPG↓P
motif |
|
DWV |
PA |
CG |
10166 |
AY292384 |
Lanzi
et al., 2006 |
polyprotein contains an NPG↓P
motif |
|
DWV |
Warwick-2009 |
CG |
10167 |
GU109335 |
Bouleau Jamois et al., unpub. |
polyprotein contains an NPG↓P
motif |
|
DWV |
Chilensis A1/Chile/2011 |
CG |
10171 |
JQ413340 |
Barriga et al., ubpub. |
|
|
DWV |
DWV_Ox/YK/2010 |
CG(p) |
10115 |
KC786223 |
Wang et al., 2013 |
|
|
DWV |
Liaoning-1/China/2017 |
CG |
10167 |
MF770715 |
Fei et al., unpub. |
|
|
DWV |
AUSTRIA-1 |
various |
4596 |
DQ224278 |
Berenyi
et al.,
2007 |
|
|
DWV |
AUSTRIA-2 |
VP2-VP1 & hel |
1426 |
DQ224279 |
Berenyi
et al.,
2007 |
|
|
DWV |
AUSTRIA-3 |
VP2-VP1 & hel |
1426 |
DQ224280 |
Berenyi
et al.,
2007 |
|
|
DWV |
AUSTRIA-4 |
VP2-VP1 & hel |
1426 |
DQ224281 |
Berenyi
et al.,
2007 |
|
|
DWV |
AUSTRIA-5 |
VP2-VP1 & hel |
1426 |
DQ224282 |
Berenyi
et al.,
2007 |
|
|
DWV |
AUSTRIA-6 |
VP2-VP1 & hel |
1426 |
DQ224283 |
Berenyi
et al.,
2007 |
|
|
DWV |
AUSTRIA-7 |
VP2-VP1 & hel |
1426 |
DQ224284 |
Berenyi
et al.,
2007 |
|
|
DWV |
AUSTRIA-8 |
VP2-VP1 & hel |
1426 |
DQ224285 |
Berenyi
et al.,
2007 |
|
|
DWV |
AUSTRIA-9 |
VP2-VP1 & hel |
1426 |
DQ224286 |
Berenyi
et al.,
2007 |
|
|
DWV |
POLAND-1 |
VP2-VP1 & hel |
1426 |
DQ224287 |
Berenyi
et al.,
2007 |
|
|
DWV |
POLAND-2 |
VP2-VP1 & hel |
1426 |
DQ224288 |
Berenyi
et al.,
2007 |
|
|
DWV |
POLAND-3 |
VP2-VP1 & hel |
1426 |
DQ224289 |
Berenyi
et al.,
2007 |
|
|
DWV |
POLAND-4 |
VP2-VP1 & hel |
1426 |
DQ224290 |
Berenyi
et al.,
2007 |
|
|
DWV |
POLAND-5 |
VP2-VP1 & hel |
1426 |
DQ224291 |
Berenyi
et al.,
2007 |
|
|
DWV |
GERMANY-1 |
VP2-VP1 & hel |
1426 |
DQ224292 |
Berenyi
et al.,
2007 |
|
|
DWV |
GERMANY-2 |
VP2-VP1 & hel |
1426 |
DQ224293 |
Berenyi
et al.,
2007 |
|
|
DWV |
GERMANY-3 |
VP2-VP1 & hel |
1426 |
DQ224294 |
Berenyi
et al.,
2007 |
|
|
DWV |
HUNGARY-1 |
VP2-VP1 & hel |
1426 |
DQ224295 |
Berenyi
et al.,
2007 |
|
|
DWV |
HUNGARY-2 |
VP2-VP1 & hel |
1426 |
DQ224296 |
Berenyi
et al.,
2007 |
|
|
DWV |
HUNGARY-3 |
VP2-VP1 & hel |
1426 |
DQ224297 |
Berenyi
et al.,
2007 |
|
|
DWV |
HUNGARY-4 |
VP2-VP1 & hel |
1426 |
DQ224298 |
Berenyi
et al.,
2007 |
|
|
DWV |
HUNGARY-5 |
VP2-VP1 & hel |
1426 |
DQ224299 |
Berenyi
et al.,
2007 |
|
|
DWV |
SLOVENIA-1 |
VP2-VP1 & hel |
1426 |
DQ224300 |
Berenyi
et al.,
2007 |
|
|
DWV |
SLOVENIA-2 |
VP2-VP1 & hel |
1426 |
DQ224301 |
Berenyi
et al.,
2007 |
|
|
DWV |
SLOVENIA-3 |
VP2-VP1 & hel |
1426 |
DQ224302 |
Berenyi
et al.,
2007 |
|
|
DWV |
SLOVENIA-4 |
VP2-VP1 & hel |
1426 |
DQ224303 |
Berenyi
et al.,
2007 |
|
|
DWV |
NEPAL-1 |
VP2-VP1 & hel |
1426 |
DQ224304 |
Berenyi
et al.,
2007 |
|
|
DWV |
NEPAL-2 |
VP2-VP1 & hel |
1426 |
DQ224305 |
Berenyi
et al.,
2007 |
|
|
DWV |
SRI LANKA-1 |
VP2-VP1 & hel |
1426 |
DQ224306 |
Berenyi
et al.,
2007 |
|
|
DWV |
SRI LANKA-2 |
VP2-VP1 & hel |
1426 |
DQ224307 |
Berenyi
et al.,
2007 |
|
|
DWV |
U.A.E.-1 |
VP2-VP1 & hel |
1426 |
DQ224308 |
Berenyi
et al.,
2007 |
|
|
DWV |
U.A.E.-2 |
VP2-VP1 & hel |
1426 |
DQ224309 |
Berenyi
et al.,
2007 |
|
|
DWV |
CANADA-1 |
VP2-VP1 & hel |
1426 |
DQ224310 |
Berenyi
et al.,
2007 |
|
|
DWV |
CANADA-2 |
VP2-VP1 & hel |
1426 |
DQ224311 |
Berenyi et al.,
2007 |
|
|
|
|
|
|
|
|
|
Varroa
destructor virus-1 / Deformed
wing virus recombinants (VDV-DWV) |
|
VDV-DWV |
VDV-1-DWV-No-5 |
CG |
10149 |
HM067437 |
Moore et al., 2011 |
polyprotein contains an NPG↓P
motif |
|
VDV-DWV |
VDV-1-DWV-No-9 |
CG |
10154 |
HM067438 |
Moore et al., 2011 |
polyprotein contains an NPG↓P
motif |
|
VDV-DWV |
Zriffin (Israel; Oct-2008) |
CG |
9473 |
JF440526 |
Zioni et al., 2011 |
polyprotein contains an NPG↓P
motif |
|
|
|
|
|
|
|
|
Varroa
destructor virus-1 (VDV) |
|
VDV |
Wageningen, Netherlands |
CG |
10112 |
AY251269 |
Ongus et al., 2004 |
polyprotein contains an NPG↓P
motif |
|
VDV |
Zriffin (Israel; Oct-2008) |
CG |
9974 |
JF440525 |
Zioni et al., 2011 |
polyprotein contains an NPG↓P
motif |
|
VDV |
VDV-1_Ox/UK/2010 |
CG(p) |
10089 |
KC786222 |
Wang et al., 2013 |
|
|
|
|
|
|
|
|
|
Kakugo virus
(KV) |
|
KV |
? |
CG |
10152 |
AB070959 |
Fujiyuki et al.,
2004 |
polyprotein contains an NPG↓P
motif |
|
KV |
KV_Ox/UK/2010 |
CG(p) |
10127 |
KC786224 |
Wang et al., 2013 |
|
|
|
|
|
|
|
|
|
Group E |
Venturia canescens picorna-like virus (VcPLV) |
|
VcPLV |
VcSRV |
pol |
2103 |
AY534885 |
Reineke and Asgari, 2005 |
|
|
Ungrouped |
Brevicoryne brassicae
picorna-like virus (BBPLV) |
|
BBPLV |
Warwick, UK |
CG |
10180 |
EF517277 |
Ryabov, 2007 |
|
|
|
|
|
|
|
|
|
Slow Bee paralysis virus (SBPV) |
|
SBPV |
Rothamsted (UK, 1986) |
CG |
9505 |
EU035616 |
de Miranda et al., 2010 |
|
|
SBPV |
Harpenden (UK, 1986) |
CG |
9424 |
GU938761 |
de Miranda et al., 2010 |
|
|
Not yet grouped |
Nasonia vitripennis virus (NvitV) |
|
NvitV-1 |
Nasonia vitripennis virus 1 |
pro(p)/pol |
2789 |
FJ790486 |
Oliveira et al., unpub. |
most
closely related to
VcPLV |
|
NvitV-2 |
Nasonia vitripennis virus 2 |
pol(p) |
1523 |
FJ790487 |
Oliveira et al., unpub. |
most
closely related to sacbrood virus |
|
NvitV-3 |
Nasonia vitripennis virus 3 |
various (with gaps) |
4970 |
FJ790488 |
Oliveira et al., unpub. |
related
to Nora virus (not an iflavirus) |
|
|
|
|
|
|
|
|
Not yet grouped |
Nilaparvata lugens honeydew virus 1 (NlHV-1) |
|
NlHV-1 |
Izumo (Japan) |
CG |
10967 |
AB766259 |
Murakami et al., 2013 |
|
|
|
|
|
|
|
|
|
Not yet grouped |
Nilaparvata lugens honeydew virus 2 (NlHV-2) |
|
NlHV-2 |
Izumo (Japan) |
CG |
10985 |
AB826459 |
Murakami et al., 2014 |
|
|
|
|
|
|
|
|
|
Not yet grouped |
Nilaparvata lugens honeydew virus 3 (NlHV-3) |
|
NlHV-3 |
Kagoshima (Japan) |
CG |
10600 |
AB826460 |
Murakami et al., 2014 |
|
|
|
|
|
|
|
|
|
Not yet grouped |
Spodoptera exigua iflavirus 1 (SeIV-1) |
|
SeIV-1 |
unnamed |
CG |
10347 |
JN091707 |
Millan-Leiva et al., 2012 |
|
|
|
|
|
|
|
|
|
Not yet grouped |
Spodoptera exigua iflavirus 2 (SeIV-2) |
|
SeIV-2 |
Korean (South Korea/2010) |
CG |
9501 |
JN870848 |
Choi et al., 2012 |
|
|
SeIV-2 |
Spain/2010 |
CG |
9504 |
KJ186788 |
Jakubowska et al., unpub. |
|
|
|
|
|
|
|
|
|
Not yet grouped |
Lygus lineolaris virus 1 (LlV-1) |
|
LlV-1 |
Washington County/MS/US/2008 |
CG |
9655 |
JF720348 |
Perera et al., 2012 |
|
|
|
|
|
|
|
|
|
Not yet grouped |
Halyomorpha halys virus (HhV) |
|
HhV |
Beltsville/MD-USA/2012 |
CG |
9271 |
KF699344 |
Sparks et al., 2013 |
|
|
|
|
|
|
|
|
|
Not yet grouped |
Heliconius erato iflavirus (HeIV) |
|
HeIV |
HeratoCRSEC/Costa Rica/2011 |
CG |
9910 |
KJ679438 |
Smith et al., 2014 |
|
|
|
|
|
|
|
|
|
Not yet grouped |
Helicoverpa armigera iflavirus (HaIV) |
|
HaIV |
HBLF2013-1 (China, 2013) |
CG |
10017 |
KX228231 |
Yuan et al., unpub. |
|
|
|
|
|
|
|
|
|
Not yet grouped |
Antheraea pernyi iflavirus (ApIV) |
|
ApIV |
LnApIV-02 |
CG |
10176 |
KF751885 |
Geng et al., 2014 |
|
|
|
|
|
|
|
|
|
Not yet grouped |
Laodelphax striatellus picorna-like virus 2 (LsPV-2) |
|
LsPV-2 |
LsPV2/South Korea/2011 |
CG |
10889 |
KM272628 |
Je et al., unpub. |
|
|
|
|
|
|
|
|
|
Not yet grouped |
Dinocampus coccinellae paralysis virus (DcPV) |
|
DcPV |
Quebec2013/CAN/2009 |
CG |
10192 |
KF843822 |
Dheilly et al., unpub. |
|
|
|
|
|
|
|
|
|
Not yet grouped |
Thaumetopoea pityocampa iflavirus 1 (TpIV-1) |
|
TpIV-1 |
Turkey/2014 |
CG |
9816 |
KP217032 |
Jakubowska et al. unpub. |
|
|
|
|
|
|
|
|
|
Not yet grouped |
Graminella nigrifrons iflavirus 1 (GnIV-1) |
|
GnIV-1 |
Ohio/USA/2014 |
CG |
9617 |
KP866792 |
Chen et al., 2015 |
|
|
|
|
|
|
|
|
|
Not yet grouped |
Opsiphanes invirae iflavirus 1 (OiIV-1) |
|
OiIV-1 |
Brazilian/2012 |
CG |
9855 |
KR534892 |
Silva et al., 2015 |
|
|
|
|
|
|
|
|
|
Not yet grouped |
La Jolla virus (LJV) |
|
LJV |
MONMEL09/France/2010 |
CG |
9722 |
KP714073 |
Webster et al., 2015 |
|
|
LJV |
MAT03/Ghana/2010 |
CG |
9786 |
KP714074 |
Webster et al., 2015 |
|
|
|
plus many more:
KP969709-969712
KP969720-969747 |
|
|
|
|
|
|
|
|
|
|
|
|
|
Not yet grouped |
Twyford virus (TwV) |
|
TwV |
no details given |
CG |
8416 |
KP714075 |
Webster et al., 2015 |
|
|
|
|
|
|
|
|
|
Not yet grouped |
Bombyx mori iflavirus (BmIV) |
|
BmIV |
BMI1/Japan/2014 |
CG |
10119 |
LC068762 |
Suzuki et al., 2015 |
|
|
BmIV |
BmIV variant 1 (Japan, 2016) |
CG |
10244 |
LC214356 |
Matsuoka et al., unpub. |
|
|
|
|
|
|
|
|
|
Not yet grouped |
Kinkell virus (KV) |
|
KV |
Dsus_PoolSeq2 |
partial |
6784 |
KU754510 |
Webster et al., 2016 |
|
|
|
|
|
|
|
|
|
Not yet grouped |
Moku virus (MV) |
|
MV |
Big Island/Hawaii/USA |
CG |
10056 |
KU645789 |
Mordecai et al., 2016 |
|
|
|
|
|
|
|
|
|
Not yet grouped |
King virus (KiV) |
|
KiV |
UWV1/USA |
partial genome |
6962 |
KX779453 |
Greninger et al., unpub. |
Yuma
myotis |
|
KiV |
UWV2/USA/2016 |
CG |
10193 |
KX779454 |
Greninger et al., unpub. |
Yuma
myotis |
|
|
|
|
|
|
|
|
Not yet grouped |
Diamondback moth iflavirus (DMIV) |
|
DMIV |
Guangzhou/China/2016 |
CG |
9580 |
KY435608 |
Chen, unpub. |
Plutella xylostella |
|
|
|
|
|
|
|
|
Not yet grouped |
Chequa iflavirus (CIV) |
|
CIV |
A14-49.4/Australia/2014 |
CG |
9932 |
KY659604 |
Sakuna et al., 2017, 2018 |
Cherax quadricarinatus |
|
|
|
|
|
|
|
|
Not yet grouped |
Pityohyphantes rubrofasciatus iflavirus |
|
PrIV |
UW1/USA/2016 |
CG |
9834 |
KX452237 |
Greninger et al., unpub. |
Pityohyphantes rubrofasciatus |
|
|
|
|
|
|
|
|
Not yet grouped |
Bat iflavirus |
|
BIV |
Bat/CAM/IfaV-P17/2013 |
CG |
10519 |
KX644939 |
Yinda et al., 2016 |
Eidolon helvum |
|
|
|
|
|
|
|
|
Not yet grouped |
Ixodes holocyclus iflavirus |
|
IhIV |
1/Australia/2000-2002 |
pp-coding region |
8841 |
KY020412 |
O'Brien et al., unpub. |
Ixodes holocyclus |
|
|
|
|
|
|
|
|
CG = complete genome; (p) = partial gene
sequence; N/A = not available on the EMBL/GenBank/DDBJ databases |
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