Waikavirus seqs
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RTSV
MCDV
AYV
Waikavirus seqs

Family: Sequiviridae

Genus: Waikavirus

Rice tungro spherical virus (RTSV)
Maize chlorotic dwarf virus (MCDV)
Anthriscus yellows virus (AYV)
 

Genus: Waikavirus

Rice tungro spherical virus (RTSV)
Virus Strain Region Length Accession No. Reference Comments
RTSV ? CG 12433 M95497 Shen et al., 1993  
RTSV Phil.1 (Philippines isolate) Capsid-coding region 4546 U71440 Zhang et al., 1993  
RTSV Phil.2 (Philippines isolate) ORFs 1, 2 & 3 6101 X98396 Thole and Hull, unpublished  
RTSV Indian isolate Capsid-coding region (p) 1032 X95284 Druka et al., 1996  
RTSV Indian isolate ORF2+ORF3 572 X98398 Thole and Hull, unpublished.  
RTSV Thai isolate ORF2+ORF3 571 X98397 Thole and Hull, unpublished.  
RTSV Malaysian isolate Capsid-coding region 2109 U70989 Zhang et al., 1997  
RTSV Vt6 CG ? ? Isogai et al., 2000  
             
Maize chlorotic dwarf virus (MCDV)
Virus Strain Region

Length

Accession No. Reference Comments
MCDV TN (Tennessee) CG

11813

U67839 Reddick et al., 1997  
MCDV M1 (USA) CG

11900

AY829112 Gingery et al., unpub.  
MCDV Severe CG

11784

AY362551 Chaouch-Hamada et al., 2004  
             
Anthriscus yellows virus (AYV)
Virus Strain Region

Length

Accession No. Reference Comments
             
             
CG = complete genome
(p) = partial gene sequence
N/A = not available on the EMBL/GenBank/DDBJ databases

References

Chaouch-Hamada, R., Redinbaugh, M.G., Gingery, R.E., Willie, K. and Hogenhout, S.A. (2004). Accumulation of maize chlorotic dwarf virus proteins in its plant host and leafhopper vector. Virology 325: 379-388.

Druka, A., Burns, T., Zhang, S. and Hull, R. (1996). Immunological characterization of rice tungro spherical virus coat proteins and differentiation of isolates from Philippines and India. J. Gen. Virol. 77: 1975-1983.

Isogai, M., Cabauatan, P.Q., Masuta, C., Uyeda, I., Azzam, O. (2000). Complete nucleotide sequence of the rice tungro spherical virus genome of the highly virulent strain Vt6. Virus Genes 20: 79-85.

Gingery, R.E., Chaouch-Hamada, R., Redinbaugh, M.G. and Hogenhout, S.A. Genetic variability in Maize chlorotic dwarf virus. Unpublished

Reavy, B., Mayo, M.A., Turnbull-Ross, A.D. and Murant, A.F. (1993). Parsnip yellow fleck and rice tungro spherical viruses resemble picornaviruses and represent two genera in a proposed new plant picornavirus family (Sequiviridae). Arch. Virol. 131: 441-446.

Reddick, B.B., Habera, L.F. and Law, M.D. (1997). Nucleotide sequence and taxonomy of maize chlorotic dwarf virus within the family Sequiviridae. J. gen. Virol. 78: 1165-1174.

Shen, P., Kaniewska, M., Smith, C. and Beachy, R.N. (1993). Nucleotide sequence and genomic organization of rice tungro spherical virus. Virology 193: 621-630.

Thole and R. Hull, John Innes Centre, Virus Research, Norwich Research Park, Colney, Norwich, NR4 7UH, UK.

Zhang, S., Jones, M.C., Barker, P., Davies, J.W., Hull, R. (1993). Molecular cloning and sequencing of coat protein-encoding cDNA of rice tungro spherical virus - a plant picornavirus. Virus Genes 7: 121-132.

Zhang, S., Davies, J.W. and Hull R. (1997). Sequences of the three coat protein genes of a Malaysian isolate of rice tungro spherical virus reveal a close relationship to the Philippine isolate. Virus Genes 15: 61-64.

 
Copyright 2006 The Pirbright Institute, UK.